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Reagents



Reagents


Chrome-acetic acid fixative


10% aqueous chromic acid                          2.5 ml

10 % aqueous acetic acid                             5.0 ml

Distilled water to                                           100 ml

 

Use: For fixation of chromosomes, nucleoli and centrioles of fungi.


Flemming fluid


Osmic acid                                                     0.1 g

Chromic acid                                                 0.2 g

Glacial acetic acid                                         01 ml

Distilled water to                                           100 ml

 

The osmic and chromic acids when mixed will keep for only3-4 weeks, The acetic acid should be added immediately before use.

Use: Used as a fixative for tissue section.

 

Fontan's fixative (Ruge's solution)

 

Glacial acetic acid                                         1.0 ml

Formalin (37-40% formaldehyde)              2.0 ml

Distilled water to                                           100 ml

 

Use: Used in spirochete staining.

 

Fomalin-acetic acid alcohol (FAA) mixture

 

60% Alcohol                                                 90.0 ml

Glacial acetic acid                                         5.0 ml

Formalin                                                        5.0 ml

 

Use: For fixation of plant material before staining.


Mercuric chloride-formalin fixative


Saturated aqueous                                         9.0 g

Solution of mercuric chloride                      280.0 ml

Commercial formalin                                    20.0 ml

 

Use: The minimum amount of destoration and fairly good cytological details are obtained, particularly in staining of various inclusion bodies if above fixative is used.

 

Moller's fixation

Lead acetate                                                   9.0 g

Distilled water to                                           2800 ml

Formalin                                                        20.0 ml

 

Precaution: Store in tightly stoppered bottle.

 

Use: Used in capsule (method of Moller) staining.

 

Newcomer's fixative.

 

Dioxane                                                          10.0 ml

Acetone                                                          10.0 ml

Petroleum ether                                             10.0 ml

Propionic acid                                               30.0 ml

Isopropyl alcohol                                          60.0 ml

 

Use: Most acetic and alcohol mixtures result in to loss of nuclei staining property and dissolution of mitochondria. This fixative overcomes this difficulty during fixation of smear.


Schaudinn's fixative

 

Absolute ethyl alcohol                                 33.0 ml

Glacial acetic acid                                         1.0 ml

Saturated solution of HgC12

(6.9g/100 ml at 20°C) in water                    66.0 ml

Use:

 

Used to fur the smear in staining of protozoa.

Used in nuclear staining (method of Robinow)

 

Susa's Fixative


Mercuric chloride                                         45.0 g

Distilled water to                                           800 ml

Sodium chloride                                           5.0 g

Trichloroacetic acid                                      20.0 g

Acetic acid (Glacial)                                     40.0 ml

Formalin (40% formaldehyde)                    200 ml

 

Use: Fixative for normal and pathological specimens before staining. 


This fixative give better result.



Zenker's fluid


Mercuric chloride                                         5.0 g

Potassium bicarbonate                                  2.5 g

Sodium sulphate                                           1.0 g

Distilled water to                                           100 ml

 

Immediately before use, add 5 ml of glacial acetic acid per 100 ml of above mixture.

Use: It is a fixative for animal tissue staining.



Zenker-formal fixative



This is similar to Zenker's fluid except that the 5 ml of formalin is added instead of acetic acid.


Salines

 

Azide saline


Sodium azide                                                 0.8 g

Physiological saline OR buffered saline     100 ml

 

Use: Azide prevents microbial decomposition. It is used as a diluting fluid.

 

Borate-calcium saline


NaCl                                                               8.0 g

CaCl2                                                              1.0 g

H3BO3                                                            1.2 g

Na2B4O7.10H2O                                            0.052 g

Distilled water to                                           1000 ml

 

Use: It is used as a cell suspension and diluting fluid tor haemagglutination experiments, where calcium is required and phosphate should be absent.

 

Buffered saline


NaCl                                                               8.0 g

K2HPO4                                                          1 : 21 g

KH2PO4                                                          0.34 g

Distilled water to                                           1000 ml

 

Use: This solution gives a pH of about 7.3 and also provides potassium and phosphate ions. It is general diluent and suspending fluid. NaCl can be diluted in different buffer solution giving desired pH.

 

Formal saline

Sodium chloride (0.9%) solution                90.0 ml

40% formaldehyde                                       10.0 ml

 

The pH is adjusted at 7.0 by addition of CaCO3 granules. 

Use: In staining of virus inclusion bodies.


Phenolized saline


Sodium chloride                                           8.5 g

Phenol                                                            5.0 g

Distilled water to                                           1000 ml

 

Physiological saline


Sodium chloride                                           8.5 g

Distilled water to                                           1000 ml

 

Use: Used for preparation of bacterial suspensions. It prevents osmolysis of bacteria.


VDRL, buffered saline solution (pH 6.0)

 

Formaldehyde (neutral, c.p.)                        0.5 ml

Na2HPO4.12H2O                                           0.093 g

KH2PO4                                                          0.170 g

NaCl                                                               10.0 g

Distilled water to                                           1000 ml

 

Dissolve all the constituents in distilled water. Check the pH of the solution. Store the reagent in screw capped bottles.

 

Use: Used for preparation of VDRL antigen.

 

Vernol-NaCI diluents


NaCl                                                               8.5 g

Barbitone (diethyl-barbituric acid)             0.575 g

Sodium barbitone                                         0.2 g

MgCl2.6H2O                                                  0.168 g

CaCl2                                                              0.028 g

Distilled water to                                           1000 ml


Preparation: stock solution concentrated x 5 is made by dissolving 5.75 g barbitone in 500 ml hot distilled water. Add 85 gm, NaCl and make up the volume to about 1400 ml. Dissolve 2.0 gm sodium barbitone in 500 ml distilled water and add it to the NaCl barbitone solution. Make up to 2000 ml. Add 1.68 g MgC12.6H20 and 0.28 g CaCl2. For use dilute 1 in 5 with distilled water.


Use: This saline may be used for complement fixation tests and gives more reproducible results.


IMViC Test Reagents


Kovac's reagent


n-amyl alcohol                                              75.0 ml

Hydrochloride acid (conc.)                          25.0 ml

P-dimethylamino-benzaldehyde                 5.0 g

 

Add aldehyde to a flask containing alcohol and dissolve by gently warming to 5S°C in a water bath. Cool and add HCI. Store the reagent in a dark glass bottle in a refrigerator.

 

Use: Kovac's reagent develop red colour in presence of indole.

 

Methyle red solution


Methyl red                                                     0.04 g

Ethyl alcohol (absolute)                               40.0 ml

Distilled water to                                           60.0 ml

 

Dissolve methyl red in ethyl alcohol and add water.

 

Use: Used in methyl red test. Add about 5 drops of the methyl red reagent in to inoculated and incubated liquid medium. Mix. Positive tests are bright red and negative are yellow.



Barritt's reagent (Voges Proskauer test)


Solution A: 5g alpha-naphthol in 100 ml of 95% ethyl alcohol. Dissolve the alpha naphthol in the ethyl alcohol with constant stirring.

 

Solution B: 40g potassium hydroxide in 100 ml water.

 

Use: Used in Voges Proskauer test. Add 1 ml of Potassium hydroxide and 3 ml of alpha naphthol in the inoculated and incubated liquid medium. A positive reaction is detected by the development of an eosin-pink colour usually in 2-5 minutes.

 

Caution: Avoid all contact with human tissues, alpha-naphthol is considered to be carcinogenic.


Other Reagents

Andrade's indicator

 

Preparation: Prepare 0.5% solution of acid fuchsin. Add 1 N NaOH to it, slowly, till colour turns slight yellow.

 

Use: Used as an indicator in sugar fermentation tube. It becomes dark red in colour at or below pH 5.5.

 

Gelatin Hydrolysis

 

Mercuric chloride solution (Frazier's solution)


Mercuric chloride                         15.0 g

Hydrochloric acid (conc.)             20.0 ml

Distilled water to                          100.0 ml

      

Use: Used for detection of gelatin breakdown. After flooding the plate with mercuric chloride solution gelatin liquifying microorganisms show clear zone around colony against opaque background.


Tannic acid solution

 

Tannic acid                                                    1.0 g

Distilled water to                                           100.0 ml

 

Use: To test gelatin hydrolysis. Tannic acid causes relative opacity around gelatin liquifying colonies, quick to develop but fading as the medium also becomes opaque.



Trichloroacetic acid


Trichloroacetic acid (C.P.)                                5.0 g

Distilled water to                                                100.0 ml

 

Dissolve the acid in the water with constant stirring.

Use: Used to test gelatin hydrolysis by microorganisms on the gelatin agar.

 

Pectin Hydrolysis

 

Hexadecyltrimethyl ammonium                         1.0 bromde

Distilled water to                                                100.0 ml

 

Use: To detect pectin hydrolysis. It precipitates intact pectin.


Starch Hydrolysis


Lugol's Iodine (Gram's Iodine)


Use:   After flooding the plate of starch agar   with  iodine solution amylolytic microorganisms show clear zone around the colony  against purple background.

 

Oxidase test reagent


Dimethyl-p-phenylene diamine hydrochloride        1.0 g

 Distilled water to        100.0 ml

 

The reagent should be made fresh daily. It should not be stored longer than one week in the refrigerator.

If the preparation becomes darkened, discard. Tetramethyl-p-phelylenediamine dihydrochloride (1%) is even more sensitive but it is more expensive and difficult to obtain.

 

Use: To test presence of certain oxidises in bacteria, the dye is reduced to deep purple colour if the test is positive.


Methylene blue (1:25000) solution


Methylene blue dye     0.04 g

Distilled water to       1000 ml


Preparation: Dissolve the methylene blue in the distilled water and dispense into regular staining bottles.

 

Use: Used in methylene blue reduction test (for determining the quality of milk.) Dilute 10 times before use.


Motility studies reagent


Carboxy-methyl-cellulose    2.0 g

Sucrose (0.2 M)             98.0 ml

Distilled water to            1000 ml

 

Preparation: Prepare 0.2 M sucrose solution by adding 68.4 g. of sucrose in 1000 ml of distilled water.

 

Use: If a bacterial culture growing on a solid medium is to be examined for motility, a loopful of culture should be mixed with a drop of 2% CMC at the centre of coverslip.

 

Methyl cellulose reagent


Carboxy methyl cellulose    10.0 g

Distilled water to               90.0 ml

 

Reparation: Dissolve the methyl cellulose in warm distilled water.

 

Use: For microscopic observation of protozoa.

 

Significance: Methyl cellulose slows down the movement of protozoa.


Resazurin (1:20,000) solution


Resazurin Distilled water to 1000 ml.

 

Preparation: Dissolve the resazurin in distilled water.

 

Use: Used in resazurin reduction test (for determining the quality of milk.)

 

Cleaning solution for glassware


(Sulphuric acid dichromate solution)

 Sodium dichromate                 25.0 g

Sulphuric acid (conc.)          1000 ml

Distilled water to                     50 ml

 

Preparation: Dissolve the dichromate crystals in 50 ml of warm water. Cool to, room temperature and add acid slowly to the preparation. Use: This preparation is used for the removal of residual organic matter from laboratory glassware. Glassware should be soaked in this solution for a number of days. Then rinsed in running tap water at least 10 times, then rinsed twice in single distilled water and finally rinsed once in double glass distilled water.

 

Ferric chloride reagent


FeCl36H2O                     12.0 g

2% Aqueous HCl        100.0 ml

 

Made up the 2% aq. HCl by adding 5.4 ml of concentrated HCl (37%) to 94.6 ml H2O.

 

Use: Used in phehyyalanine deaminase test. Development of green colour indicate positive phenylalanine deaminase test.


Diphenylamine reagent (nitrate test)


Diphenylamine                  0.7 g

Sulphuric acid (conc.)       60 ml

Distilled water                28.8 ml

 

Preparation: Dissolve diphenylamine in a mixture of sulphuric acid and water. Cool and add slowly 11.3 ml of concentrated hydrochloric acid. After the solution has stood for 12 hours some of the base separates, showing that the reagent is saturated.

 

Use: Used in detection of nitrate in the medium. This reagent produces a blue black colour in the presence of either nitrites or nitrates. It is necessary to make sure that no nitrites are present by Trommsdorf -regent when it is used as a test for nitrates.

 

Trommsdorf's reagent


Zinc, chloride solution (20%)       100.0 ml

Starch                                             4.0 g

Potassium iodide                              2.0 g

Distilled water                            100.0 ml

 

Preparation: Prepare 100 ml of 20% aqueous ZnC12 solution and add slowly with constant stirring to a mixture of 4.0 g of starch in water. Dissolve completely by heating. Dilute with water and add the potassium iodide. Made the volume to 1 liter by additions of more water, filter and store in brown-stoppered bottle.

 

Use: For detection of nitrites. This reagent produce intense blue-black colour in present of nitrite.

 

 Nitrite test reagents

Solution A:

Sulfanilic acid                     8.0 g

5 N acetic acid (1 part glacial acetic acid to

2.5 parts water)                   1000 ml


Solution B:

Dimethyl-alpha-napthylamine      5.0 g

5 N acetic acid                               1000 ml

Immediately before use, mix equal volumes of solution A and solution B.

 

Use: Add 0.1 nil of test reagent to 5 ml of broth. A development of red colour indicate presence of nitrite.

Caution: Although at this time it is not know for sure, there is a possibility that dimethyl-alphanapthylamine in solution B may be carcinogenic. For reasons of safety, avoid all contact with tissues.

Nessler's reagent (Ammonia test)


Potassium iodide

50.0 g

Ammonia free distilled water (cold)

35.0 ml

Mercuric chloride solution (saturated)

35.0 ml

Potassium hydroxide (50% aqueous solution)

400 ml

Distilled water

530 ml

 

Dissolve potassium iodide in ammonia free distilled water. Add a saturated solution of mercuric chloride to it. (slight precipitate persists.) Add solution of potassium hydroxide. Dilute to 1 litre, allow to settle for one week and decant the supernatant for use. Store in brown bottle.

 

Use: Used for detection of ammonia. Positive reaction is shown by a colour ranging from a pale but distinct yellow to a dark brown precipitate.

Buffers

Acetic buffer

Solution required

A: 0.2 M solution of acetic acid (11.55 m1 in 1000 ml).

B: 0.2 M solution of sodium acetate (16.4 g of C2H3O2Na or 27.2 g of C2H3O2Na.3H2O in 1000 ml). X ml of A + Y ml of B, diluted to a total of 400 ml

 

X

Y

pH

185.2

14.8

3.6

176.0

24.0

3.8

164.0

36.0

4.0

147.2

52.8

4.2

122.0

78.0

4.4

102.0

98.0

4.6

80.0

120.0

4.8

59.2

140.8

5.0

42.0

158.0

5.2

35.2

164.8

5.4

19.2

180.8

5.6



Barbitone (veronal) buffer

 

Solutions required:


A: 0.2M solution of sodium barbitone (sodium diethyl barbiturate) (7.37 g in 1000 ml). B: 0.2M HCl 100 ml of A+ X of B, diluted to a total of 400 ml

 

X

pH

3.0

9.2

5.0

9.0

8.0

8.8

12.0

8.6

18.0

8.4

25.4

8.2

35.0

8.0

45.0

7.8

55.0

7.6

65.0

7.4

78.0

7.2

86.0

7.0

90.0

6.8



Bicarbobnate-CO2 buffer



Concentration of CO2 in gaseous phase


5%

10%

20%

7.4

7.1

6.8

7.8

7.5

7.2

 

 

Concentration              0.02 M

Of NaHCO3                  0.05 M

 

Above solution give desired pH only at 370C.


Borax-NaOX buffer


A: 0.05 M solution of borax (19.05 g in 1000 ml, 0.02 M in terms of sodium borate) B: 0.2 M NaOH 100 ml of A + X ml B, diluted to a total of 400 ml


 

X

pH

0.0

9.28

14.0

9.35

22.0

9.4

35.2

9.5

46.0

9.6

58.0

9.7

68.0

9.8

77.2

9.9

86.0

10.0

92.0

10.1


Boric acid-Borax buffer

Solution required:

A: 0.2 M solution of boric acid (12.4 g in 1000 ml).

B: 0.2 M solution of borax (19.05 g in 1000 ml : 0.2 M in terms of sodium borate).

100 mi of A + X ml of B, diluted to a total of 400 ml.


 

X

pH

4.0

7.6

6.2

7.8

9.8

8.0

14.6

8.2

23.0

8.4

35.0

8.6

60.0

8.8

118.0

9.0

230

9.2


Cacodylate buffer


Solutions required:

 

A: 0.2 M solution of sodium cacodylate [42.8 g of Na (CH3)2 AsO2.3H2O in 1000 ml]. B: 0.2 M NaOH 100 ml of A + X ml of B diluted to a total of 400 ml.

 

X

pH

5.4

7.4

8.4

7.2

12.6

7.0

18.6

6.8

26.6

6.6

36.6

6.4

47.6

6.2

59.2

6.0

69.6

5.8

78.4

5.6

86.0

5.4

90.0

5.2

94.0

5.0



Carbonate-Bicarbonate buffer



Solutions required:

A: 0.2 M solution of anhydrous sodium carbonate. (2.12 g in 100 ml). B: 0.2 M solution of sodium bicarbonate. (1-68 g in 100  ml).

X ml of A + Y ml of B, diluted to a total of 400 ml.

 

X

Y

pH

8.0

92.0

9.2

19.0

81.0

9.4

32.0

68.0

9.6

44.0

56.0

9.8

55.0

45.0

10.0

66.0

34.0

10.2

77.0

23.0

10.4

85.0

15.0

10.6



Citrate buffer

Solutions required:
 

A: 0.1 M solution of citric acid (19.21 g in 1000 ml).

B: 0.1 M solution of sodium citrate (29.41 g C6H5O7Na3.2H2O in 1000 ml).

X ml of A + Y ml of B, diluted to a total of 400 ml.


 

X

Y

pH

186.0

14.0

3.0

174.8

25.2

3.2

160.0

40.0

3.4

148.0

52.0

3.6

140.0

60.0

3.8

132.0

68.0

4.0

126.0

74.0

4.2

112.0

88.0

4.4

102.0

98.0

4.6

92.0

108.0

5.0

82.0

118.0

5.0

72.0

128.0

5.2

64.0

136.0

5.4

54.8

145.2

5.6

47.2

152.8

5.8

38.0

162.0

6.0

28.8

171.2

6.2


Citrate-Phosphate buffer

Solutions required:

A: 0.1 M solution of citric acid (19.21 g in 1000 ml).

B: 0.2 M solution of dibasic sodium phosphate (28.39 g of Na2HPO4 or 71.7 g of Na2HPO4.12H2O in 1000 ml). X ml of A + Y Ml of B, diluted to a total of 100 ml.

 

X

Y

pH

44.6

5.4

2.6

42.2

7.8

2.8

39.8

10.2

3.0

37.7

12.3

3.2

35.9

14.1

3.4

33.9

16.1

3.6

32.3

17.7

3.8

30.7

19.3

4.0

29.4

20.6

4.2

27.8

22.2

4.4

26.7

23.3

4.6

25.2

24.8

4.8

24.3

26.7

5.2

23.3

26.7

5.2

22.2

27.8

5.4

21.0

29.0

5.6

19.7

30.3

5.8


Glycine-NaOH buffer


Solutions required:

 

A: 0.2 M solutions of &cine (15.01 g in 100 ml).

B: 0.2M NaOH 100 ml of A + X ml of B, diluted to a total of 400 ml.


X

pH

8.0

8.6

12.0

8.8

17.6

9.0

24.0

9.2

33.6

9.4

44.8

9.6

54.4

9.8

64.0

10.0

77.2

10.4

91.0

10.6


Maleate buffer


Solutions required:
 

A: 0.2M solutions of acid sodium maleate (8 g of NaOH+23.2 g of maleic acid of 19.6 g of maleic anhydride in 1000 ml).

B: 0.2MNaOH 100 ml of A + X pf B, diluted to a total of 400 ml.



X

pH

14.4

5.2

21.0

5.4

30.6

5.6

41.6

5.8

53.8

6.0

66.0

6.2

76.0

6.4

83.2

6.6

88.8

6.8


Phosphate buffer


Solutions required:

A: 0.2 M solution of monobasic sodium phosphate. (31.2 g NaH2PO4.2H2O in 1000 ml). B: 0.2 M solution of dibasic sodium phosphate. (28.39 g of Na2HPO4 or 7 1.7 g of N3HP0,. 12H20 in 1000 ml). X ml of A + Y of B, diluted to a total of 200 ml.

 

X

Y

pH

92.0

8.0

5.8

87.7

12.3

6.0

81.5

18.5

6.2

73.5

26.5

6.4

62.5

37.5

6.6

51.0

49.0

6.8

39.0

61.0

7.0

28.0

72.0

7.2

19.0

81.0

7.4

13.0

87.0

7.6

8.5

91.5

7.8

5.3

94.7

8.0



Succinate buffer

Solutions required:

A: 0.2 M solution of succinic acid (23.6 g in 1000 ml)

B: 0.2MNaOH 100 ml of A + X ml of B, diluted to a total of 400 ml.



X

pH

30.0

3.8

40.0

4.0

53.0

4.2

66.8

4.4

80.0

4.6

94.0

4.8

106.8

5.0

121.2

5.2

136.8

5.4

150.0

5.6

162.8

5.8

174.0

6.0



Tris (hydroxymethyl) aminomethane HCL (Tris HCL buffer)


Solution required: 


A: 0.2 M solution of tris (hydroxymethyl) aminomethane (24.2 g in 1000 ml). B: 0.2 M HCL 100 ml of A + X ml of B, diluted to a total of 400 ml.

X

pH

10.0

9.0

16.2

8.8

24.4

8.6

33.0

8.4

43.8

8.2

53.6

8.0

65.0

7.8

76.8

7.6

82.8

7.4

88.4

7.2


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